ANOVA BLCA result package

Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-04-08 12:06:33
iorio@ebi.ac.uk


Drug Domain: GDSC1000_paper_set, Analysis Domain: BLCA specific


MANOVA Results Summary
association id
FEATURE
Drug id
Propr
Public
Drug Name
Drug Target
N FEATURE pos
N FEATURE neg
log max Conc tested
FEATURE pos logIC50 MEAN
FEATURE neg logIC50 MEAN
FEATURE deltaMEAN IC50
FEATURE IC50 effectSize
FEATURE neg Glass delta
FEATURE pos Glass delta
ANOVA FEATURE pval
ANOVA Tissue pval
ANOVA MSI pval
ANOVA FEATURE %FDR
a1
loss_cnaBLCA18_(CHD9,CNOT1,CYLD,MMP2,NUP93)
1230
1
IOX2
EGLN1
3
16
-2.3
-1.37
0.0769
-1.44
3.3 **
5.2 **
1.4 *
6.67e-05
NA
NA
11
a2
TP53_mut
136
1
Mitomycin C
DNA crosslinker
15
4
2.77
-1.84
1.11
-2.94
2.8 **
4.1 **
2.7 **
9.94e-05
NA
NA
11
a3
gain_cnaBLCA15_(ASXL1)
269
1
NSC-207895
MDM4
6
13
3
5.01
2.96
2.05
2.4 **
3 **
1.7 *
1.7e-04
NA
NA
12
a4
ARID1A_mut
1529
1
MLN4924
NEDD8-activating enzyme
3
13
0
2.21
-0.796
3.01
2.8 **
2.7 **
4.4 **
6.34e-04
NA
NA
24
a5
TP53_mut
133
1
Doxorubicin
DNA intercalating
15
4
0.0237
-2.69
0.221
-2.91
2.3 **
2 **
2.4 **
7.13e-04
NA
NA
24
a6
TP53_mut
135
1
Gemcitabine
DNA replication
15
4
0.0237
-3.36
1.46
-4.82
2.3 **
3.5 **
2.2 **
7.27e-04
NA
NA
24
a7
ARID1A_mut
305
1
TPCA-1
IKK
5
14
3
5.31
2.94
2.37
2.1 **
1.9 *
3.2 **
8.72e-04
NA
NA
24
a8
ARID1A_mut
228
1
KIN001-102
AKT1
5
14
2.33
4.8
2.83
1.97
2.1 **
1.9 *
3.2 **
9.29e-04
NA
NA
24