ANOVA PANCAN result package
Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:02:03 iorio@ebi.ac.uk
Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer
Individual Feature analysis: gain_cnaPANCAN18
Feature details and cell panel numbers
Binary feature equal to 1 for samples having the genomic region(s) cnaPANCAN18 amplified (see genomic region decoding file for further infos on this region)
Number of cell lines positive for this feature: 56
Statistically significant associations identified = 2
| association id |
FEATURE |
Drug id |
Propr |
Public |
Drug Name |
Drug Target |
N FEATURE pos |
N FEATURE neg |
log max Conc tested |
FEATURE neg logIC50 MEAN |
FEATURE pos logIC50 MEAN |
FEATURE deltaMEAN IC50 |
FEATURE IC50 effectSize |
FEATURE neg Glass delta |
FEATURE pos Glass delta |
ANOVA FEATURE pval |
Tissue ANOVA pval |
MSI ANOVA pval |
ANOVA FEATURE FDR % |
a214 |
gain_cnaPANCAN18 |
229 |
1 |
1 |
LY317615 |
PRKCB (PKCbeta) |
52 |
869 |
3.00, 2.33 |
3.17 |
4.22 |
1.04 |
0.63 . |
0.62 . |
0.68 . |
1.01e-04 |
1.34e-25 |
9.64e-01 |
7.8 |
a261 |
gain_cnaPANCAN18 |
152 |
1 |
1 |
CP466722 |
ATM |
53 |
870 |
2.77 |
2.57 |
3.41 |
0.841 |
0.62 . |
0.62 . |
0.66 . |
1.73e-04 |
5.31e-45 |
3.29e-01 |
11 |
All-tests volcano plot
