ANOVA PANCAN result package
Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:02:08 iorio@ebi.ac.uk
Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer
Individual Feature analysis: gain_cnaPANCAN300
Feature details and cell panel numbers
Binary feature equal to 1 for samples having the genomic region(s) cnaPANCAN300 amplified (see genomic region decoding file for further infos on this region)
Number of cell lines positive for this feature: 28
Statistically significant associations identified = 2
| association id |
FEATURE |
Drug id |
Propr |
Public |
Drug Name |
Drug Target |
N FEATURE pos |
N FEATURE neg |
log max Conc tested |
FEATURE neg logIC50 MEAN |
FEATURE pos logIC50 MEAN |
FEATURE deltaMEAN IC50 |
FEATURE IC50 effectSize |
FEATURE neg Glass delta |
FEATURE pos Glass delta |
ANOVA FEATURE pval |
Tissue ANOVA pval |
MSI ANOVA pval |
ANOVA FEATURE FDR % |
a251 |
gain_cnaPANCAN300 |
255 |
1 |
1 |
CP724714 |
ERBB2 |
24 |
897 |
2.33 |
4.27 |
3.57 |
-0.706 |
0.75 . |
0.78 . |
0.41 |
1.55e-04 |
2.33e-11 |
3.51e-01 |
10 |
a475 |
gain_cnaPANCAN300 |
1046 |
1 |
1 |
681640 |
WEE1, CHEK1 |
24 |
733 |
0.693 |
2.09 |
2.94 |
0.854 |
0.78 . |
0.78 . |
0.82 . |
6.46e-04 |
1.91e-08 |
4.13e-04 |
22 |
All-tests volcano plot
