ANOVA PANCAN result package
Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:02:12 iorio@ebi.ac.uk
Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer
Individual Feature analysis: loss_cnaPANCAN162
Feature details and cell panel numbers
Binary feature equal to 1 for samples having the genomic region(s) cnaPANCAN162 deleted (see genomic region decoding file for further infos on this region)
Number of cell lines positive for this feature: 25
Statistically significant associations identified = 2
| association id |
FEATURE |
Drug id |
Propr |
Public |
Drug Name |
Drug Target |
N FEATURE pos |
N FEATURE neg |
log max Conc tested |
FEATURE neg logIC50 MEAN |
FEATURE pos logIC50 MEAN |
FEATURE deltaMEAN IC50 |
FEATURE IC50 effectSize |
FEATURE neg Glass delta |
FEATURE pos Glass delta |
ANOVA FEATURE pval |
Tissue ANOVA pval |
MSI ANOVA pval |
ANOVA FEATURE FDR % |
a279 |
loss_cnaPANCAN162 |
1149 |
1 |
1 |
TW 37 |
BCL2, BCL2L1 |
23 |
894 |
1.61 |
-0.551 |
0.0822 |
0.634 |
0.54 . |
0.54 . |
0.41 |
2.01e-04 |
7.18e-16 |
5.77e-05 |
12 |
a465 |
loss_cnaPANCAN162 |
1239 |
1 |
1 |
YK 4-279 |
RNA helicase A |
20 |
772 |
2.3 |
1.53 |
2.41 |
0.876 |
0.69 . |
0.69 . |
0.58 . |
6.04e-04 |
1.44e-08 |
4.48e-02 |
21 |
All-tests volcano plot
