ANOVA PANCAN result package

Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:01:06
iorio@ebi.ac.uk


Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer


Individual drug analysis: 1054


Drug details and screening numbers

Drug Name: PD-0332991
Drug ID: 1054
Synonyms: PD-0332991
Brand name:
Target: CDK4, CDK6

Number of cell lines screened: 825
Screening concentration range(s): 0.015625 to 4 uM and 0.0078125 to 2 uM


Statistically significant associations identified = 7
association id
FEATURE
Drug id
Propr
Public
Drug Name
Drug Target
N FEATURE pos
N FEATURE neg
log max Conc tested
FEATURE neg logIC50 MEAN
FEATURE pos logIC50 MEAN
FEATURE deltaMEAN IC50
FEATURE IC50 effectSize
FEATURE neg Glass delta
FEATURE pos Glass delta
ANOVA FEATURE pval
Tissue ANOVA pval
MSI ANOVA pval
ANOVA FEATURE FDR %
a31
RB1_mut
1054
1
1
PD-0332991
CDK4, CDK6
73
750
1.386, 0.693
1.63
3.27
1.64
1.1 *
1 *
1.3 *
1.21e-08
5.03e-28
1.75e-02
0.0064
a96
loss_cnaPANCAN144_(BNC2,CDKN2A,JAK2,PSIP1)
1054
1
1
PD-0332991
CDK4, CDK6
473
350
1.386, 0.693
2.17
1.48
-0.687
0.44
0.42
0.45
8.75e-06
1.7e-27
1.84e-02
1.5
a172
gain_cnaPANCAN275_(SDHC)
1054
1
1
PD-0332991
CDK4, CDK6
43
780
1.386, 0.693
1.71
2.96
1.25
0.79 .
0.79 .
0.78 .
5.67e-05
2.39e-27
1.87e-02
5.4
a173
loss_cnaPANCAN389_(RB1)
1054
1
1
PD-0332991
CDK4, CDK6
94
729
1.386, 0.693
1.66
2.65
0.993
0.63 .
0.62 .
0.7 .
5.87e-05
2.4e-27
1.87e-02
5.6
a349
gain_cnaPANCAN270_(JUN)
1054
1
1
PD-0332991
CDK4, CDK6
16
807
1.386, 0.693
1.75
3.1
1.36
0.85 .
0.84 .
0.97 .
3.5e-04
3.31e-27
1.9e-02
16
a391
gain_cnaPANCAN280_(ARID4B,FH)
1054
1
1
PD-0332991
CDK4, CDK6
50
773
1.386, 0.693
1.71
2.68
0.963
0.6 .
0.61 .
0.54 .
4.34e-04
3.44e-27
1.9e-02
18
a519
gain_cnaPANCAN273
1054
1
1
PD-0332991
CDK4, CDK6
34
789
1.386, 0.693
1.73
2.8
1.07
0.67 .
0.67 .
0.67 .
7.75e-04
3.8e-27
1.91e-02
25


All-tests volcano plot