ANOVA PANCAN result package
Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:02:21 iorio@ebi.ac.uk
Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer
Individual Feature analysis: loss_cnaPANCAN231
Feature details and cell panel numbers
Binary feature equal to 1 for samples having the genomic region(s) cnaPANCAN231 deleted (see genomic region decoding file for further infos on this region)
Number of cell lines positive for this feature: 52
Statistically significant associations identified = 2
| association id |
FEATURE |
Drug id |
Propr |
Public |
Drug Name |
Drug Target |
N FEATURE pos |
N FEATURE neg |
log max Conc tested |
FEATURE neg logIC50 MEAN |
FEATURE pos logIC50 MEAN |
FEATURE deltaMEAN IC50 |
FEATURE IC50 effectSize |
FEATURE neg Glass delta |
FEATURE pos Glass delta |
ANOVA FEATURE pval |
Tissue ANOVA pval |
MSI ANOVA pval |
ANOVA FEATURE FDR % |
a330 |
loss_cnaPANCAN231 |
1378 |
1 |
1 |
Bleomycin (50 uM) |
DNA damage |
52 |
880 |
3.91 |
2.27 |
3.27 |
1 |
0.48 |
0.48 |
0.59 . |
2.99e-04 |
6.61e-31 |
3.36e-04 |
15 |
a447 |
loss_cnaPANCAN231 |
208 |
1 |
1 |
SB-715992 |
KIF11 |
49 |
873 |
-2.06 |
-1.83 |
-0.811 |
1.01 |
0.57 . |
0.57 . |
0.57 . |
5.72e-04 |
2.3e-33 |
1.92e-02 |
21 |
All-tests volcano plot
