ANOVA PANCAN result package

Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:01:07
iorio@ebi.ac.uk


Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer


Individual drug analysis: 1003


Drug details and screening numbers

Drug Name: Camptothecin
Drug ID: 1003
Synonyms: 7-Ethyl-10-Hydroxy-Camptothecin,SN-38
Brand name: SN-38
Target: TOP1

Number of cell lines screened: 849
Screening concentration range(s): 0.000390625 to 0.1 uM


Statistically significant associations identified = 7
association id
FEATURE
Drug id
Propr
Public
Drug Name
Drug Target
N FEATURE pos
N FEATURE neg
log max Conc tested
FEATURE neg logIC50 MEAN
FEATURE pos logIC50 MEAN
FEATURE deltaMEAN IC50
FEATURE IC50 effectSize
FEATURE neg Glass delta
FEATURE pos Glass delta
ANOVA FEATURE pval
Tissue ANOVA pval
MSI ANOVA pval
ANOVA FEATURE FDR %
a45
gain_cnaPANCAN280_(ARID4B,FH)
1003
1
1
Camptothecin
TOP1
52
794
-2.3
-4.14
-2.53
1.61
0.92 .
0.94 .
0.76 .
1.45e-07
9.27e-24
1.02e-01
0.053
a108
gain_cnaPANCAN275_(SDHC)
1003
1
1
Camptothecin
TOP1
44
802
-2.3
-4.12
-2.66
1.46
0.83 .
0.84 .
0.66 .
1.69e-05
1.98e-23
1.04e-01
2.6
a276
gain_cnaPANCAN363_(ASXL1)
1003
1
1
Camptothecin
TOP1
85
761
-2.3
-4.14
-3.18
0.959
0.54 .
0.54 .
0.54 .
1.93e-04
2.88e-23
1.05e-01
12
a316
gain_cnaPANCAN411_(BLM,CRTC3,FANCI,IDH2,NR2F2,PCSK6)
1003
1
1
Camptothecin
TOP1
22
824
-2.3
-4.09
-2.46
1.63
0.92 .
0.93 .
0.7 .
2.81e-04
3.05e-23
1.06e-01
15
a321
gain_cnaPANCAN277_(DHX9)
1003
1
1
Camptothecin
TOP1
27
819
-2.3
-4.09
-2.68
1.4
0.79 .
0.8 .
0.64 .
2.86e-04
3.06e-23
1.06e-01
15
a421
gain_cnaPANCAN213_(MCM3)
1003
1
1
Camptothecin
TOP1
47
799
-2.3
-4.1
-3.03
1.07
0.6 .
0.62 .
0.46
5.15e-04
3.35e-23
1.06e-01
20
a471
EWSR1-FLI1_mut
1003
1
1
Camptothecin
TOP1
16
830
-2.3
-4.01
-5.93
-1.92
1.1 *
1.1 *
1.2 *
6.22e-04
3.45e-23
1.06e-01
22


All-tests volcano plot