ANOVA PANCAN result package

Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:01:43
iorio@ebi.ac.uk


Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer


Individual Feature analysis: CHEK2_mut


Feature details and cell panel numbers

Binary feature equal to 1 for samples harboring mutations in CHEK2

Number of cell lines positive for this feature: 5


Statistically significant associations identified = 5
association id
FEATURE
Drug id
Propr
Public
Drug Name
Drug Target
N FEATURE pos
N FEATURE neg
log max Conc tested
FEATURE neg logIC50 MEAN
FEATURE pos logIC50 MEAN
FEATURE deltaMEAN IC50
FEATURE IC50 effectSize
FEATURE neg Glass delta
FEATURE pos Glass delta
ANOVA FEATURE pval
Tissue ANOVA pval
MSI ANOVA pval
ANOVA FEATURE FDR %
a116
CHEK2_mut
167
1
1
OSU-03012
PDPK1 (PDK1)
5
866
2.77
1.92
4
2.08
1.7 *
1.7 *
1 *
1.91e-05
1.95e-11
6.56e-03
2.7
a260
CHEK2_mut
200
1
1
LAQ824
HDAC
5
868
0.0237
-2.79
-0.706
2.08
1.7 *
1.7 *
0.97 .
1.66e-04
6.38e-14
8.72e-01
11
a275
CHEK2_mut
180
1
1
Thapsigargin
sarco-endoplasmic reticulum Ca2+-ATPases
5
852
-0.669
-3.89
-0.738
3.15
1.6 *
1.6 *
1 *
1.9e-04
3.83e-04
6.87e-02
11
a410
CHEK2_mut
182
1
1
Obatoclax Mesylate
BCL2, BCL2L1, MCL1
5
859
2.77
-0.916
1.36
2.28
1.3 *
1.3 *
0.76 .
4.92e-04
5.09e-14
2.97e-02
20
a477
CHEK2_mut
133
1
1
Doxorubicin
DNA intercalating
5
867
0.0237
-1.77
0.852
2.62
1.6 *
1.6 *
1.2 *
6.48e-04
5.31e-05
5.89e-02
22


All-tests volcano plot