ANOVA PANCAN result package

Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:01:20
iorio@ebi.ac.uk


Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer


Individual Feature analysis: KRAS_mut


Feature details and cell panel numbers

Binary feature equal to 1 for samples harboring mutations in KRAS

Number of cell lines positive for this feature: 129


Statistically significant associations identified = 7
association id
FEATURE
Drug id
Propr
Public
Drug Name
Drug Target
N FEATURE pos
N FEATURE neg
log max Conc tested
FEATURE neg logIC50 MEAN
FEATURE pos logIC50 MEAN
FEATURE deltaMEAN IC50
FEATURE IC50 effectSize
FEATURE neg Glass delta
FEATURE pos Glass delta
ANOVA FEATURE pval
Tissue ANOVA pval
MSI ANOVA pval
ANOVA FEATURE FDR %
a13
KRAS_mut
1526
1
1
RDEA119 (rescreen)
MAP2K1 (MEK1), MAP2K2 (MEK2)
116
759
1.61
1.86
0.673
-1.18
0.72 .
0.71 .
0.84 .
1.1e-10
9.33e-64
1.62e-01
0.00014
a22
KRAS_mut
1498
1
1
AZD6244
MAP2K1 (MEK1), MAP2K2 (MEK2)
121
797
1.39
1.8
0.627
-1.17
0.69 .
0.68 .
0.78 .
5.44e-10
1.34e-55
5.9e-02
0.00041
a29
KRAS_mut
1060
1
1
PD-0325901
MAP2K1 (MEK1), MAP2K2 (MEK2)
107
731
-1.386, 0.693
-0.937
-2.18
-1.24
0.71 .
0.7 .
0.77 .
5.99e-09
6.16e-47
3.13e-02
0.0034
a38
KRAS_mut
1014
1
1
RDEA119
MAP2K1 (MEK1), MAP2K2 (MEK2)
106
731
1.61
1.69
0.454
-1.23
0.7 .
0.69 .
0.79 .
5.04e-08
5.44e-52
1.02e-01
0.022
a65
KRAS_mut
1015
1
1
CI-1040
MAP2K1 (MEK1), MAP2K2 (MEK2)
109
727
2.3
2.35
1.56
-0.783
0.54 .
0.53 .
0.61 .
2.4e-06
1.29e-38
2.59e-02
0.6
a74
KRAS_mut
1372
1
1
Trametinib
MAP2K1 (MEK1), MAP2K2 (MEK2)
112
781
0
-0.828
-2.47
-1.64
0.67 .
0.66 .
0.76 .
3.06e-06
1.03e-62
2.17e-01
0.68
a255
KRAS_mut
1047
1
1
Nutlin-3a
MDM2
108
738
2.08, 1.39
3.53
3.53
0.00118
0.00087
0.00087
0.00083
1.59e-04
8.56e-32
6.36e-02
10


All-tests volcano plot