ANOVA PANCAN result package

Francesco Iorio, EMBL - European Bioinformatics Institute
result parsing started on 2016-03-31 19:01:21
iorio@ebi.ac.uk


Drug Domain: GDSC1000_paper_set, Analysis Domain: panCancer


Individual Feature analysis: NRAS_mut


Feature details and cell panel numbers

Binary feature equal to 1 for samples harboring mutations in NRAS

Number of cell lines positive for this feature: 61


Statistically significant associations identified = 12
association id
FEATURE
Drug id
Propr
Public
Drug Name
Drug Target
N FEATURE pos
N FEATURE neg
log max Conc tested
FEATURE neg logIC50 MEAN
FEATURE pos logIC50 MEAN
FEATURE deltaMEAN IC50
FEATURE IC50 effectSize
FEATURE neg Glass delta
FEATURE pos Glass delta
ANOVA FEATURE pval
Tissue ANOVA pval
MSI ANOVA pval
ANOVA FEATURE FDR %
a15
NRAS_mut
1060
1
1
PD-0325901
MAP2K1 (MEK1), MAP2K2 (MEK2)
54
784
-1.386, 0.693
-0.994
-2.57
-1.58
0.9 .
0.9 .
0.86 .
1.51e-10
2.24e-47
3.05e-02
0.00017
a20
NRAS_mut
1014
1
1
RDEA119
MAP2K1 (MEK1), MAP2K2 (MEK2)
54
783
1.61
1.64
0.0136
-1.62
0.92 .
0.92 .
0.84 .
4.75e-10
1.37e-52
9.97e-02
0.00039
a52
NRAS_mut
1372
1
1
Trametinib
MAP2K1 (MEK1), MAP2K2 (MEK2)
55
838
0
-0.92
-2.77
-1.85
0.75 .
0.76 .
0.65 .
5.36e-07
5.91e-63
2.16e-01
0.17
a54
NRAS_mut
1498
1
1
AZD6244
MAP2K1 (MEK1), MAP2K2 (MEK2)
57
861
1.39
1.73
0.364
-1.37
0.8 .
0.8 .
0.73 .
8.74e-07
1.08e-54
6.11e-02
0.27
a90
NRAS_mut
261
1
1
TL-1-85
MAP3K7 (TAK1)
58
861
2.33
3.18
3.03
-0.153
0.093
0.092
0.11
7.33e-06
2.09e-75
5.72e-01
1.3
a94
NRAS_mut
1526
1
1
RDEA119 (rescreen)
MAP2K1 (MEK1), MAP2K2 (MEK2)
53
822
1.61
1.78
0.457
-1.32
0.8 .
0.8 .
0.76 .
8.08e-06
3.56e-62
1.68e-01
1.4
a97
NRAS_mut
1015
1
1
CI-1040
MAP2K1 (MEK1), MAP2K2 (MEK2)
56
780
2.3
2.33
1.09
-1.24
0.85 .
0.86 .
0.8 .
8.77e-06
1.75e-38
2.61e-02
1.5
a98
NRAS_mut
260
1
1
NG-25
MAP3K7 (TAK1)
58
861
2.33
2.63
2.62
-0.016
0.0094
0.0092
0.012
9.73e-06
4.23e-61
9.1e-01
1.6
a132
NRAS_mut
155
1
1
AP-24534
ABL
58
823
-0.669
0.395
0.56
0.166
0.1
0.099
0.15
2.74e-05
2.88e-37
9.06e-01
3.4
a239
NRAS_mut
249
1
1
XL-184
VEGFR, MET, RET, KIT, FLT1, FLT3, FLT4, Tie2,AXL
58
861
1.63
2.67
2.9
0.224
0.17
0.17
0.21
1.32e-04
1.24e-26
2.89e-01
9.1
a307
NRAS_mut
308
1
1
XL-880
MET
57
859
1.63
0.229
0.494
0.266
0.19
0.19
0.2
2.61e-04
8.18e-28
8.03e-01
14
a327
NRAS_mut
1036
1
1
PLX4720
BRAF
55
790
2.3
3.82
3.77
-0.0534
0.041
0.041
0.051
2.97e-04
6.44e-41
7.19e-01
15


All-tests volcano plot